Browse of TCMCG053C21256 protein

CDS

Accession Number	TCMCG053C21256
gbkey	CDS
Protein Id	XP_034218674.1
Location	complement(join(311407..312008,312196..312567,312950..314033,314347..314642,315588..315666,315790..315877,317746..317893,317965..318226,318998..320341,320622..320888,321994..322237,322644..322703,323080..323400,323528..323606,323785..323864,323952..324029,324592..324672,324757..324844,325025..325111,325393..325523,325631..325704,327041..327064))
Gene	LOC117630057
GeneID	117630057
Organism	Prunus dulcis

Protein

Length	1962aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA631757
db_source	XM_034362783.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Prunus dulcis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTTTTCAAAATCGGCGGTCTTCATCAAATATCATGGTTTCAGTTCCTCCCGCATGATTCTGAGTTGATCCCACAACCAGATAAAAGCAGTGTGAAAGATGCTGCCACACAGCTGGTACTTTCATCGCATCTACAGTTGCAGAAGGAAGGATTTCTCAGCACATGGACCAACTCTTTTGTTGGGCCTTGGGATCCATCTCAAGGTTTGCACAATCCGGATGAGAAAATTAAACTCTGGCTTTTTCTTCCTGGCCGTCATTCAAGTTATGCTGACCCTGCTCAAGCTGCAGTCTCTAAATTAAGAGTTGTTGCATCTGGACTTTGGATGTCTCCTGGGGACTCAGAGGAGGTTGCGACTGCCCTTTCTCAGGCTTTAAGGAATCGTATAGAAAGAGCGCTGTCTGGACTAGCCTACATGAGATTTGGAGATGTATTTTCAAAGTTCCATGCATCACAAAGTGAAGAGCTTCTCAGGAGAGGCCAGCCTACAGTTGAGTTTATCTTTGCTGCCACTGAAGAGGGAATCTTTGTGCATGCTTTAGTATCTGCGAAGCATATCCGAGCACTTTCCAGTGATGATTTGGAGAGAGTACAAAAGCATTCTTCCCAAAATTCATGTTATGGGCTTCCAGTTATTGTTTCTCCACATGGAATATGTGGGAGGCTAACTGGATGTTGTCCAGGTGATCTTGTCAAACAAGTGTATTTCAGTTCTAGCAAGCTTAAGACTTCAAATTTCATTGGTCTGCCAAACCATGTCTCTCAAGGTTCTGGTTCCCAACTGATGTGGCAAAATTGCTATGTTGAAGTTACCCTTGGCTGTCCTAGACCTAGAAGTGACCGGGCCTTACAATCAAACTCAAATTCCTTCAGGAATGTAGTGAAGCATCACCCTGTTGAATCTCCTTCTTTGGGAAGAGGTGATCAGAAGGGTTCATTGGATAATATATCAGTTTATGAAAAAACATTTGTATATCCGGCTGAGGCAGTGCTTGTCCCATCCTTGCAAGTGGCCGGATCATCTCTGAAAAGATTTTGGCTTCAAAATTGGATTGGACCCTCCATGCCTGGCTCATCATTCTTTATGCTTTGTTCTGACAGCATAGAACCAATGGAGGAATGCAACGAAACCAATGGGATTCGCACACAACGTGGTTATAATAGTAGTAGCAACAGTAATAGTAGCAGCATTAGTAGCATAAGCAGCAGCTCCAGCGATAGTGATGACAAGATGGCTACAGGAGCCAGTGAACTAGAGGCAGATGCCGATTCCTTAACCTGTAGACAGTCTGGTTTATCTTTTAATAATCGGTTGGGAAATGATATCTCCAAATTGGGTTTTAAGCGTCCACGAGATGGGATGGCAGAGTCATTTGCTGAAGTGGGAACAGCTACAAGTGCTTCTCTGCAGGATACATACAACTCTGATTTTGGTTCCATGGAAGTCAACAACTCAGCGATCACTGTAGTTACAAATGACCAGATTGGATCTCTTTGGGATTGGGATGGTGATGACAGATATGGCACTGATATCCATGCTTTGATTAATGAATTTGGAGATTTTGGTGACTTATTTGAAAGTGATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTACTGAATCTCAGGCTCTCATGTTTTCTGCACCAGATTTTGGCGATGTAGTTGACAACCCAGTTGGGGTGATGGATGTTTCTGATCAGTTGCTCTTGTCCGAGGGTTTTGCATCCTTTGAAAGCTTTATTCCACCCCCTCCTGCAGCCATGGAAGAGACGCTCATAAAAAATCAAGAAGCCATAAATAGTGCTTTGTCCTCGGGTCCAGTGAACTGCTCTTCAGCATCTAATATAAGTGAATTTGATCACATAATAAAAGCTGAGGCACTGATGACATTTGCTCCTGAATATGGAGCTGTTGAAACACCTACAAGTGAAGTCTCATCTTCCATTTTCAGAAGCCCATACTTGCCCAAATCTAGAAAAGCAGAGAGTTCAAATTCAAGCCCGAGCATTTACACATATGGTCCAACACCACCTTCTTCTTGCTTTGATGGATTTGATGAGAAGACTGGCATACCGTCAAATTCTAAACCATTTGCTGGAAAGAAAGATGCAAGCAACATTTTCCGGTCGAAGAACTATTACACTCATGTGGAGAGTGGAAAAGAGCAACAAGACAGAAGATTGCTTACAAGTAGTAATGGCATTGCGGTTGCACATGATGGGGTGGCACAATCTCCTTTCCCTGTTCTCAATTCTACAAATGCGGTCAAAGCGGCACAGAGGAAAATGACTGAAGGCACATTTGAATCAGAAAATTCCTTTCTATCTATGAGGACCATTCCTGCAACTGAAATTGAGTGCATCTTATTTCAGGCGTCAATGTGTAGAATACGACACACCTTGTTGTCTTCAAGTAGTCTCTCATCTATTGGTTTTAGTAGGCTTCCAGGTGACCAAACTGTCATGCCAGAAAACATATCTGGAAAGTATGAGGCGAGGAGGAAAGAATCGATACCCGTTAGAATTGCTGGTGATATTGATGGAGGAATGATAGATGGGCATCTCAATGCCCCTGTTGGTGTCTGGCGCTCCGTAGGAGCTCCTAGAGTCCCAAAACCCACAAGTTCATCTAGTATGGAAATTAGCTCGTCCTTGCCTCATACTTCATTCAATGATGAAAGTATGCTTTCTTATGGGAGACAACCACTTCAGGAACTTCTTGATGGTTTGTCATTACTTGTACAGCAAGCTACTTCCTTTGTTGATTTGGCCCTGGACTCAGATTGTAGTGATGGTCCTTATGGTTGGCTGGCGTTACAAGAGCAATGGAGGAAGGGATTTTCTTGTGGGCCGTCTATGGTCCATGCAGGTTGTGGGGGTACACTGGCTTCTTGTCACTCCCTGGACATTGCTGGTGTCGAGTTAGTTGATCCACTCTCTGCTGATGTGCATGCTTCATCTGTAATTAGTTTGCTGCAGTCTGACATAAAGACAGCCTTAAAATCTGCGTTTGGTATTTTGGATGGGCCATTGCCTGTCACTGATTGGTGCCGAGGTCGCAACCAATCAGGTGAAAGCACAGTTGATGGATATTCTGCTGAGTCCACTATAAGTGAATGTAAAGATTCATCAAGTATTGTAGCTCCCTCTATTATAGAACCATTAAGCCCATCACCATCTTGTTCTGCTGGATCAACTTGCCTTAAAGTTTCTAGTGCAATGGATGGAGCAAAAGTGGACGAGACATCCCAAAGAAGATCAAACCAAGAAAACTGTACTTCTGAGTCTGATCTGCAGATGTCCTCCCGGCTAAGACCGACACTTTTTGTTATTCCGTTGCCTGCTATACTCGTTGGGTATCAAGACGATTGGCTTAAGACATCAGCAAGCTCTCTGCAACTTTGGGAAAAGGCTCCGCTTGAGCCATATGCTCTACAAAAACCTATTACTTATTATGTTGTATGTCCAGACATTGATCCCCTTACATCTGCTGCTGCCGATTTTTTCCAACAACTAGGAACTGTCTATGAAACATGCAAACTGGGAACTCATTTACCCCAGAGTTTTGGGAGCCAAATGGAGGTTGACTCTGGGAGAAGGCCATCGTCTGGGTTTGTCCTACTTGATTGTCCTCAAGCAATGAAGATAGAAAGTAGAAATGCATCTCTTGTGGGCTCACTAAGCGATTATTTTCTTTCTATTTCGAATGGTTGGGACTTGACAAGCTACCTTAAGTCTCTCTCAAAGGCTCTCAAAGCTTTGAAACTTGGTCACTGCTTGTCCACAAATGCAAAAGAAGGAAGTAGTGGTCCTTCTACGGTGATTTATGTAGTGTGCCCCTTCCCTGAGCCTATTGCAATTTTACAGACTGTCATTGAATCTTCTGTTGCTATTGGATCAGTCATTTTCCAATCAGACAGAGAAAGGAGATCTATATTGTACAGTCAGGTTTCGAAGGCATTAAGCTACTCGGCCACAGTGGACGAGGCATCAATATCAAATATTTTAGTACTCTCTGGGTTTGGTATTCCTAAATTGGTACTGCAGATTGTGACAGTGGATGCCATTTTTAAAGTTACAAGCCCATCATTGAATGAACTTGTAATTCTCAAGGAGACTGCTTTTACTGTTTACAACAAGGCTCGCCGAATATCACGGGGAGCCTCTAGTGATGCAGTCCAATCATCACTGTCTAGTAGATCCCATACAGTCCTCTCGCAAATGTCTTCTCCTACTCCAGGGACGTGGAAGGACTGTGGTGGCCCTCGAATTACTGGGCATTCCCTTCCAAGAGAGGGTGAGATGGATGCTAGTTTGAGGACTGGTAGCTGGGATAGTTCATGGCAAACAACAAGAACTGGAGCAGCAAACTGCGATCCCAACAGAATTGGAGATTTTTTTTCTCAAGATGAGACTCGCTACATGTTTGAACCACTTTTTATTCTTGCAGAACCCGGTTCTCTGGAGCGTGCATTTTCACCTTTAGCTTTTGGTAATTTACCATCAGAACCTTCAAAGGCATTGTCCGATGACATCAGTGGAGGCTTTATGCAGAGTACAAGTTTAGGTGGAAGTGCGGATTCTGGATCAGGCTCTCAGGCTGATGGATCAGAGCTAGATAAGATTCCTCCTAGCCTACATTGTTGCTACGGATGGACAGAGGATTGGCGTTGGCTAATATGCATCTGGACAGATTCAAGGGGGGAGTTACTTGATAGCCACATATTCCCTTTTGGTGGAATTAGCAGTAGACAGGACACAAAGGGACTGGAATGTCTTTTTGTGCAAGTTCTGCAGCAAGGCTGTCAAATACTGCAGGCTTGCTCTTCGGATACCGGTGTTGCCAAGCCGAGGGACTTTGTGATTGCACGCATTGGAAGTTTCTACGAACTTGAATACCAAGAGTGGCAGAAAGCAATTAATTCAGTTGGGGGTTCAGAAGTGAAAAAATGGCACTTGCAACTGCGGCGATCTGTGTCTGATGGAGTGTCTGCTAGTAGTAATGGGCCTTCCTTGCAGCAGCAGGAGATGAGTTTGATTCAAGAAAGAACCCTACCTTCTTCACCTGGTCCTCTGTATGGCAGCTCTCACTCAAAAATATCTGGATTTATGAAAGGCGGTTTAGGACAACCTTCTGTGAGAAAGCAGCTTATGGGCACACAGTTGATTGACAGCTCAAGGAGTTTGCTTCAGTGGGTGCAGAGTATCAGCTTCATTACAATTGCAATTGATCATTCTTTACATCTTGTTTTTCCAGCAGATACGCAATCACCAGGAGCTCAAGGTGGTGTTGGTGTGGGCTCATCAGGGTATCTGGAAGGCTTCACACCTGTGAAGTCTCTTGGTTCCACACCTGCTGCTTACATTCTGATCCCATCACCCAGCATGCGTTTCCTCCCTCCAACACCACTTCAGCTGCCCACATGCCTCACTGCTGAATCACCTCCACTAGCCCATCTCCTTCACAGTAAAGGCTCTGCTATTCCCCTTTCTACTTGTTTTGTGGTCTCAAAAGCTGTACCTACTATGAGGAGAGATTATAGGAGCAACTTGAAAGAAGAATGGCCTTCAACTCTTTTGGTCAGTCTTATTGATCATTATGGAGGTAATAACTTTAGCCAAGAAAAACTCATGAGAGGTAATACCAAACAAGTGGGAAGGAGTCCAAGCTCGGAAGCTAGAGAATTGGAAATTGAGACGCATGTAATTCTTGAATCCCTGGCAGCAGAGCTTCATGCACTCTCTTGGATGACTGTGAGTCCAGCATACCTGGAGAGGCGAACTGCACTGCCTTTTCACTGTGACATGGTTTTGAGATTAAGAAGGCTTTTGCATTTTGCTGATAAGGACCTCTCCAGGCATCAAGAGAAGCCATAG

Protein:   MWTNVFKIGGLHQISWFQFLPHDSELIPQPDKSSVKDAATQLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSYADPAQAAVSKLRVVASGLWMSPGDSEEVATALSQALRNRIERALSGLAYMRFGDVFSKFHASQSEELLRRGQPTVEFIFAATEEGIFVHALVSAKHIRALSSDDLERVQKHSSQNSCYGLPVIVSPHGICGRLTGCCPGDLVKQVYFSSSKLKTSNFIGLPNHVSQGSGSQLMWQNCYVEVTLGCPRPRSDRALQSNSNSFRNVVKHHPVESPSLGRGDQKGSLDNISVYEKTFVYPAEAVLVPSLQVAGSSLKRFWLQNWIGPSMPGSSFFMLCSDSIEPMEECNETNGIRTQRGYNSSSNSNSSSISSISSSSSDSDDKMATGASELEADADSLTCRQSGLSFNNRLGNDISKLGFKRPRDGMAESFAEVGTATSASLQDTYNSDFGSMEVNNSAITVVTNDQIGSLWDWDGDDRYGTDIHALINEFGDFGDLFESDVLPFGEPPGTTESQALMFSAPDFGDVVDNPVGVMDVSDQLLLSEGFASFESFIPPPPAAMEETLIKNQEAINSALSSGPVNCSSASNISEFDHIIKAEALMTFAPEYGAVETPTSEVSSSIFRSPYLPKSRKAESSNSSPSIYTYGPTPPSSCFDGFDEKTGIPSNSKPFAGKKDASNIFRSKNYYTHVESGKEQQDRRLLTSSNGIAVAHDGVAQSPFPVLNSTNAVKAAQRKMTEGTFESENSFLSMRTIPATEIECILFQASMCRIRHTLLSSSSLSSIGFSRLPGDQTVMPENISGKYEARRKESIPVRIAGDIDGGMIDGHLNAPVGVWRSVGAPRVPKPTSSSSMEISSSLPHTSFNDESMLSYGRQPLQELLDGLSLLVQQATSFVDLALDSDCSDGPYGWLALQEQWRKGFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADVHASSVISLLQSDIKTALKSAFGILDGPLPVTDWCRGRNQSGESTVDGYSAESTISECKDSSSIVAPSIIEPLSPSPSCSAGSTCLKVSSAMDGAKVDETSQRRSNQENCTSESDLQMSSRLRPTLFVIPLPAILVGYQDDWLKTSASSLQLWEKAPLEPYALQKPITYYVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHLPQSFGSQMEVDSGRRPSSGFVLLDCPQAMKIESRNASLVGSLSDYFLSISNGWDLTSYLKSLSKALKALKLGHCLSTNAKEGSSGPSTVIYVVCPFPEPIAILQTVIESSVAIGSVIFQSDRERRSILYSQVSKALSYSATVDEASISNILVLSGFGIPKLVLQIVTVDAIFKVTSPSLNELVILKETAFTVYNKARRISRGASSDAVQSSLSSRSHTVLSQMSSPTPGTWKDCGGPRITGHSLPREGEMDASLRTGSWDSSWQTTRTGAANCDPNRIGDFFSQDETRYMFEPLFILAEPGSLERAFSPLAFGNLPSEPSKALSDDISGGFMQSTSLGGSADSGSGSQADGSELDKIPPSLHCCYGWTEDWRWLICIWTDSRGELLDSHIFPFGGISSRQDTKGLECLFVQVLQQGCQILQACSSDTGVAKPRDFVIARIGSFYELEYQEWQKAINSVGGSEVKKWHLQLRRSVSDGVSASSNGPSLQQQEMSLIQERTLPSSPGPLYGSSHSKISGFMKGGLGQPSVRKQLMGTQLIDSSRSLLQWVQSISFITIAIDHSLHLVFPADTQSPGAQGGVGVGSSGYLEGFTPVKSLGSTPAAYILIPSPSMRFLPPTPLQLPTCLTAESPPLAHLLHSKGSAIPLSTCFVVSKAVPTMRRDYRSNLKEEWPSTLLVSLIDHYGGNNFSQEKLMRGNTKQVGRSPSSEARELEIETHVILESLAAELHALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKDLSRHQEKP